Frontiers Multiple-Allele MHC Class II Epitope Engineering by a Molecular Dynamics-Based Evolution Protocol

MHCflurry 2.0: Improved Pan-Allele Prediction of MHC Class I-Presented Peptides by Incorporating Antigen Processing - ScienceDirect

High-resolution profiling of MHC II peptide presentation capacity reveals SARS-CoV-2 CD4 T cell targets and mechanisms of immune escape

Frontiers Pangenomic and immunoinformatics based analysis of Nipah virus revealed CD4+ and CD8+ T-Cell epitopes as potential vaccine candidates

PDF) Impact of Structural Observables From Simulations to Predict the Effect of Single-Point Mutations in MHC Class II Peptide Binders

PANDORA v2.0: Benchmarking peptide-MHC II models and software improvements

Frontiers Multiple-Allele MHC Class II Epitope Engineering by a Molecular Dynamics-Based Evolution Protocol

major histocompatibility complex class ii - List of Frontiers' open access articles

A transformer-based model to predict peptide–HLA class I binding and optimize mutated peptides for vaccine design

A transfer-learning approach to predict antigen immunogenicity and T-cell receptor specificity

Advances in the Evolutionary Understanding of MHC Polymorphism: Trends in Genetics

High-resolution profiling of MHC II peptide presentation capacity reveals SARS-CoV-2 CD4 T cell targets and mechanisms of immune escape

Toward Guided Mutagenesis: Gaussian Process Regression Predicts MHC Class II Antigen Mutant Binding

Mutant MHC class II epitopes drive therapeutic immune responses to cancer

Utility of language model and physics-based approaches in modifying MHC Class-I immune-visibility for the design of vaccines and therapeutics